Table of Contents
Is Blast2GO free?
Blast2GO does now offer a paid for “Pro” service, but the basic version is still “free” as in money. And if your group has the technical capabilities, this can be used at a large scale on local infrastructure.
How do I run Blast2GO?
To start a new Blast2GO project you just have to load your sequence data from a file into Blast2GO. At the “File” menu, go to “Load Sequences” and select the file containing your sequences. The application accepts text files containing one ore more DNA or protein sequences in FASTA or FASTQ format.
What is OmicsBox?
OmicsBox is a bioinformatics software solution which allows to get from reads to insights with ease. Use OmicsBox for the NGS data analysis of genomes, transcriptomics and metagenomes. OmicsBox is structured in Modules. Depending on your needs you can combine different modules required for your data analysis.
What is eggNOG Mapper?
eggNOG-mapper is a tool for functional annotation of large sets of sequences based on fast orthology assignments using precomputed clusters and phylogenies from the eggNOG database. Orthology assignment is ideally suited for functional inference.
What is eggNOG bioinformatics?
eggNOG (evolutionary genealogy of genes: Non-supervised Orthologous Groups) is a public resource in which thousands of genomes are analyzed at once to establish orthology relationships between all their genes.
What type of data does the eggNOG database store?
eggNOG uses a relational database system (PostgreSQL) to store primary data and precomputed orthologous groups. Search format: Full text, protein name and COG name searches can be mixed with multiple search terms.
How does eggNOG-Mapper work?
EggNOG-mapper is a tool for fast functional annotation of novel sequences. It uses precomputed orthologous groups and phylogenies from the eggNOG database (http://eggnog5.embl.de) to transfer functional information from fine-grained orthologs only.
What is omics used for?
Omics technologies provide the tools needed to look at the differences in DNA, RNA, proteins, and other cellular molecules between species and among individuals of a species.